Amanda J. Haes

Amanda J. Haes
238 IATL
  • B.A., Wartburg College (1999)
  • M.S., Northwestern University (2001)
  • Ph.D., Northwestern University (2004)
  • National Research Council Postdoctoral Fellow, Naval Research Laboratory (2004-2006)

Surface-enhanced spectroscopy, plasmonics, nanoscience and nanotechnology, experimental physical chemistry

Research Interests: 

Revolutions spawned by nanoscience research are becoming and will continue to become parts of our reality. At the heart of these nanotechnologies are nanoscale materials that exhibit novel size-dependent chemical and physical properties. These materials can be used as building blocks for larger-scale devices with applications ranging from electronics to sensors. To develop and optimize these devices, controlled fabrication/synthesis of the nano-building blocks must be developed, the fundamental properties of the materials must be understood, and the surface chemistries of the nano-building blocks must be controlled.

The Haes Research Group focuses on synthesizing standard gold and/or silver nanostructures and subsequently modifying their surfaces with novel, perm-selective surface chemistries for the direct and quantitative detection of small molecules and metabolites. Surface enhanced Raman scattering (SERS) is used to directly detect the small molecules while the novel surface layers facilitate molecular transport and recognition specificity. In comparison to traditional biological recognition elements, perm-selective and/or imprinted surface chemistries replace antibodies and/or nucleic acid functionality and should be relatively more stable in terms of temperature, matrix, shelf life, and pH. Finally, these materials and detection platforms are integrated with macroscale (cuvette and well-plate) to capillary electrophoresis platforms for the ultimate analysis of small sample volumes with fast analysis times. Current applications include: anti-cancer drug metabolism, hormone metabolism, Parkinson's disease biomarker detection, Vitamin D and metabolite detection for asthma, osteoporosis & cystic fibrosis, and small molecule, drug, and explosives detection.

Understanding Nanoparticle Synthesis & Quality Control Issues

Over the past 15-20 years, an effort to synthesize nanostructures with a high degree of monodispersity in shape and size was sought. Despite these efforts, most solution-phase nanoparticle preparations or storage conditions yield some degree of nanostructure heterogeneity which will cause variations in the resulting chemical and physical properties of the nanomaterials. This lack of "quality control" leads to poor prediction of nanoscale properties and as a result, limited application reproducibility. For instance, nanoparticle purification using high g x force centrifugation can yield linear chains or clusters while low g x force centrifugation or filtration yields <5% of clustered nanoparticles. In other words, nanoparticles are like finicky biomolecules - what you do to them during storage and handling can impact their properties and function. In an effort to use nanoparticles in a reproducible manner, we have learned that quality control measures must be taken and understood.

Perm-Selective Surfaces on Nanomaterials for Enhanced Spectroscopy

Plasmonic nanoparticles are excellent substrates for enhancing spectroscopic signatures of molecules. Surface chemistry and surface energy are two nanoparticle parameters that must be considered for reproducible use of these materials for fundamental studies and in various applications. This is both a challenge and an opportunity. To address this, we synthesize solution-phase noble metal nanoparticles with perm-selective surface chemistries (i.e. surface chemistries that promote the selective diffusion of analytes near the metal surface) for applications in SERS.

Reducing Sample Volumes Required per Assay using Capillary Electrophoresis

Gold nanoparticle surface chemistry and morphology are exploited to impact the detection of small molecules using capillary electrophoresis. Gold nanoparticles are modified with self assembled monolayers (SAMs) composed of thioctic acid, 6-mercaptohexanoic acid, or 11-mercaptoundecanoic acid. NMR, extinction spectroscopy, zeta potential, X-ray photoelectron spectroscopy, and flocculation provided information regarding the morphology, surface chemistry, optical properties, surface charge, SAM packing density, and stability of the nanoparticles, respectively. These well-characterized gold nanoparticles are included as pseudostationary phases in capillary electrophoresis. Nanoparticle stability and surface chemistry are vital for achieving reproducible detection of Parkinson’s disease biomarkers.

Improving Environmental and Health Diagnostics

Leukemia treatment typically includes chemotherapy to force the disease into remission and additional anti-cancer therapy using anti-cancer drugs to prevent subsequent relapses. The go-to drug for the anti-cancer treatment for acute lymphoblastic leukemia is 6-mercaptopurine. For most patients, this drug must be used in combination with other medications to promote its anti-cancer properties. Personalized treatment is important because as with most drugs, 6-mercaptopurine is metabolized into active, inactive, and toxic metabolites by multiple enzymes. Because everyone exhibits different enzyme levels, personalized treatment is warranted; however, this process take a long time and/or the patient serves as a guinea pig, and symptoms are observed after a prescribed drug dosage. To combat the negative impacts this can have on patients, we are developing a novel method in which drug metabolism is monitored using capillary electrophoresis and/or SERS.

Recent Publications: 
  • H.T. Phan, S. Geng, A.J. Haes, "Microporous Silica Membranes Promote Plasmonic Nanoparticle Stability for SERS Detection of Uranyl," Nanoscale, accepted November 2020, (DOI:TBD).
  • W. Xi, A.J. Haes, "Elucidation of pH Impacts on Monosubstituted Benzene Derivatives using Normal Raman and Surface-Enhanced Raman Scattering" Journal of Chemical Physics, 2020, 153(18) 184707 (DOI:10.1063/5.0029445)
  • R.A. Harder, L. Wijenayaka, H.T. Phan, A.J. Haes, "Tuning Gold Nanostar Morphology for the SERS Detection of Uranyl" Journal of Raman Spectroscopy, 2020, early view (DOI:.10.1002/jrs.5994)
  • K. Wongkamhaeng, J. Wang, J.A. Banas, D.V. Dawson, J.A. Holloway, A.J. Haes, I. Denry, "Antimicrobial Efficacy of Platinum-doped Silver Nanoparticles" Journal of Biomedical Materials Research Part B: Applied Biomaterials, 2020, 108(8) 3393-3401 (DOI: 10.1002/jbm.b.34674).
  • H.T. Phan, T.S. Heiderscheit, A.J. Haes, "Understanding Time-Dependent Surface-Enhanced Raman Scattering from Gold Nanosphere Aggregates using Collision Theory" Journal of Physical Chemistry C, 2020, 124(26), 14287-14296 (DOI: 10.1021/acs.jpcc.0c03739)
  • J. Langer, D.J. Aberasturi, J. Aizpurua, R.A. Alvarez-Puebla, B. Auguié, J.J. Baumberg, G.C. Bazan, S.E.J. Bell, A. Boisen, A.G. Brolo, J. Choo, D. Cialla-May, V. Deckert, L. Fabris, K. Faulds, F. J. García de Abajo, R. Goodacre, D. Graham, A.J. Haes, C.L. Haynes, C. Huck, T. Itoh, M. Käll, J. Kneipp, N.A. Kotov, H. Kuang, E.C. Le Ru, H.K. Lee, J-F. Li, X.Y. Ling, S. Maier, T. Mayerhoefer, M. Moskovits, K. Murakoshi, J-M. Nam, S. Nie, Y. Ozaki, I. Pastoriza-Santos, J. Perez-Juste, J. Popp, A. Pucci, S. Reich, B. Ren, G.C. Schatz, T. Shegai, S. Schlücker, L-L. Tay, K.G. Thomas, Z-Q. Tian, R.P. Van Duyne, T. Vo-Dinh, Y. Wang, K.A. Willets, C. Xu, H. Xu, Y. Xu, Y.S. Yamamoto, B. Zhao, and L.M. Liz-Marzán, "Present and Future of Surface Enhanced Raman Scattering," ACS Nano, 2020, 14(1), 28-117 (DOI: 10.1021/acsnano.9b04224)
  • H.T. Phan, A.J. Haes, "What Does Nanoparticle Stability Mean?" Journal of Physical Chemistry C, 2019, 123(27), 16495-16507 (DOI:10.1021/acs.jpcc.9b00913).
  • W. Xi, A.J. Haes, "Elucidation of HEPES Affinity to and Structure on Gold Nanostars," Journal of the American Chemical Society, 2019, 141(9), 4034-4042 (DOI: 10.1021/jacs.8b13211).
  • W. Xi, A. Volkert, M.C. Boller, A.J. Haes, "Vibrational Frequency Shifts for Monitoring Non-Covalent Interactions between Molecular Imprinted Polymers and Analgesics," Journal of Physical Chemistry C, 2018, 122(40), 23068–23077 (DOI: 10.1021/acs.jpcc.8b07771).
  • G. Lu, A.J. Haes, T.Z. Forbes, "Detection and Identification of Solids, Surfaces, and Solutions of Uranium Using Vibrational Spectroscopy," Coordination Chemistry Reviews, 2018, 374, 314-344 (DOI: 10.1016/j.ccr.2018.07.010).
  • H.T. Phan, A.J. Haes, "Impacts of pH and Intermolecular Interactions on Surface-Enhanced Raman Scattering Chemical Enhancements," Journal of Physical Chemistry C, 2018, 122, 14846-14856 (DOI: 10.1021/acs.jpcc.8b04019).
  • G. Lu, A.J. Johns, B. Neupane, H.T. Phan, D.M. Cwiertny, T.Z. Forbes, A.J. Haes, "Matrix-independent Surface-Enhanced Raman Scattering Detection of Uranyl using Electrospun Amidoximated Polyacrylonitrile Mats and Gold Nanostars," Analytical Chemistry, 2018, 90(11), 6766-6772 (DOI: 10.1021/acs.analchem.8b00655).
  • W. Xi, H.T. Phan, A.J. Haes, "How to Accurately Predict Solution-phase Gold Nanostar Stability," Analytical & Bioanalytical Chemistry, 2018, 410 (24), 6113-6123 (DOI: 10.1007/s00216-018-1115-6).
  • A.I. Owais, G. Lu, K. Keratithamkul, M.J. Kanellis, A.J. Haes, "Silver Diamine Fluoride Chemical Mechanisms of Action as a Caries Arresting and Preventing Agent," Journal of the California Dental Association, 2018, 46(2), 113-120.
  • W. Xi, B.K. Shrestha, A.J. Haes, "Promoting Intra- and Intermolecular Interactions in Surface-Enhanced Raman Scattering," Analytical Chemistry, 2018, 90(1), 128-143.
  • G. Lu, T.Z. Forbes, A.J. Haes, "SERS Detection of Uranyl using Functionalized Gold Nanostars promoted by Nanoparticle Shape and Size," Analyst, 2016, 141, 5137-5143 (DOI: 10.1039/C6AN00891G).
  • G. Lu, B. Shrestha, A.J. Haes, "Importance of Tilt Angles of Adsorbed Aromatic Molecules on Nanoparticle Rattle SERS Substrates," Journal of Physical Chemistry C, 2016, 120, 20759-20767 (DOI: 10.1021/acs.jpcc.6b02023).
  • G. Lu, T.Z. Forbes, A.J. Haes, "Evaluating Best Practices in Raman Spectral Analysis for Uranium Speciation and Relative Abundance in Aqueous Solutions," Analytical Chemistry2016, 88, 773-780 (DOI: 10.1021/acs.analchem.5b03038).
  • V.H. Grassian, A.J. Haes, I.A. Mudunkotuwa, P. Demokritou, A.B. Kane, C.J. Murphy, J.E. Hutchison, J.A. Isaacs, Y-S. Jun, B. Karn, S.I. Khondaker, S.C. Larsen, B.L.T. Lau, J.M. Pettibone, O.A. Sadik, N.B. Saleh, C. Teague, "NanoEHS - Defining Fundamental Science Needs: No Easy Feat when the Simple itself is Complex," Environmental Science: Nano, 2016, 3, 15-27 (DOI: 10.1039/C5EN00112A).
  • B. Shrestha, A.J. Haes, "Improving Surface Enhanced Raman Signal Reproducibility using Gold-Coated Silver Nanospheres Encapsulated in Silica Membranes," Journal of Optics, 2015, 17, 114017 (doi://10.1088/2040-8978/17/11/114017).
  • L. Wijenayaka, M.R. Ivanov, C.M. Cheatum, A.J. Haes, "Improved Parametrization for Extended Derjaguin, Landau, Verwey, and Overbeek Predictions of Functionalized Gold Nanosphere Stability," Journal of Physical Chemistry C, 2015, 119(19) 10064-10075.
  • G. Lu, A.M. Goodman, B. Ayres, Z. Builta, A.J. Haes, "Near Real-Time Determination of Metabolic Parameters for Unquenched 6-Mercaptopurine and Xanthine Oxidase Samples using Capillary Electrophoresis," Journal of Pharmaceutical and Biomedical Analysis, 2015, 111, 51-56.
  • A.A. Volkert, M-C.S. Pierre, B. Shrestha, A.J. Haes, "Implications of Sample Aging on the Formation of Internally Etched Silica Coated Gold Nanoparticles," RSC Advances, 2015, 5, 3774-3780.
  • A.A. Volkert and A.J. Haes, “Advancements in Nanosensors using Plastic Antibodies,” Analyst, 2014, 139(1) 21-31.
  • M.S. Pierre and A.J. Haes, “Purification Implications on SERS Activity of Silica Coated Gold Nanospheres,” Analytical Chemistry, 2012, 84(18) 7906-7911.
  • M.R. Ivanov and A.J. Haes, “Anionic Functionalized Gold Nanoparticle Continuous Full Filling Separations: Importance of Sample Concentration,” Analytical Chemistry, 2012, 84(3) 1320-1326.
  • M.S. Pierre, P.M. Mackie, M. Roca, and A.J. Haes, “Correlating Molecular Surface Coverage and Solution-Phase Nanoparticle Concentration to Surface-Enhanced Raman Scattering Intensities,” Journal of Physical Chemistry C, 2011, 115(38) 18511-18517.
  • V. Subramaniam, L. Griffith, and A.J. Haes, “Influencing Capillary Electrophoresis with Mercaptoundecanoic Acid Functionalized Gold Nanoparticles,” Analyst, 2011, 136(17) 3469-3477.
  • A.A. Volkert, V. Subramaniam, M.R. Ivanov, A.M. (Jones) Goodman, and A.J. Haes, “Salt-Mediated Self Assembly of Thioctic Acid on Gold Nanoparticles,” ACS Nano, 2011, 5(6) 4570-4580.
  • M.R. Ivanov and A.J. Haes, “Nanomaterial Surface Chemistry Design for Advancements in Capillary Electrophoresis Modes,” Analyst, 2011, 136(1) 54-63.
  • A.A. Volkert, V. Subramaniam, and A.J. Haes, “Implications of Citrate during the Seeded Growth Synthesis of Gold Nanoparticles,” Chemical Communications, 2011, 47(1) 478-480.
  • K. Ryu, A.J. Haes, H-Y. Park, S. Nah, J. Kim, H. Chung, M-Y. Yoon, and S-H. Han, “Use of Peptide for Selective and Sensitive Detection of an Anthrax Biomarker via Peptide Recognition and Surface-Enhanced Raman Scattering,” Journal of Raman Spectroscopy, 2010, 41(2) 121-124.
  • M. Roca, N.H. Pandya, S. Nath, and A.J. Haes, “Linear Assembly of Gold Nanoparticle Clusters via Centrifugation,” Langmuir, 2010, 26(3) 2035-2041.
  • M.R. Ivanov, H.R. Bednar, and A.J. Haes, “Investigations of the Mechanism of Gold Nanoparticle Stability and Surface Functionalization in Capillary Electrophoresis,” ACS Nano, 2009, 3(2) 386-394.
  • M. Roca and A.J. Haes, “Silica – Void – Gold Nanoparticles: Temporally Stable Surface-Enhanced Raman Scattering Substrates,” Journal of the American Chemical Society, 2008, 130(43) 14273-14279.
  • M. Roca, P.M. Mackie, and A.J. Haes, “Design of a Biocompatible and Optically-Stable Solution-Phase Substrate for SERS Detection,” Materials Research Society Symposium Proceedings, 2008 (Volume date 2009) (1133E) 1133-AA09-02/07.
  • M. Roca and A.J. Haes, “Probing Cells with Noble Metal Nanoparticle Aggregates,” Nanomedicine, 2008, 3(4) 555-565.